Hmmm ..ok I basically have a bike set up like yours ...except no twin Weber set set up ...but do use the 1200 short block ...actually 1100 heads ...with early 75-77 cams ...my ignition is the out of business c 5 programmable ignition ..the best ignition ever made for early oldwings ...the problems with the early points ignition is they use springs for timing advance that are small old and very unreliable and no adjusting ..this also true with electronic set ups made to replace them ...the dyna set ups made this problem even worse as there adjustment to adapt was worse than the points ...one of the best things and worse things about oldwing 4s is they use 2 trimming belts ...in reality this is like 2 motors in one ..if the belts are perfectly in sync in tension you can never time the motor a tighter belt and a looser belt motor is impossible to time with the ignition set ups out there for 1000 head bikes ...even 1200 and 1100 ignition fall prey to the belt situation ...in oldwings ..plus they are totally non adjustable ...and the number one cause why Fuel injection never seems to work right on these motors cause FI needs to be able to control timing as well as fuel to work good ..so on my bike with its progressive Weber 2 barrel carb and it's programmable timing advance ..witch I can tell you is huge over stock setup is the biggest reason my bike has tons of power ..as long as I get the belt timing tension equal on both sides the bike is a monster ...I had the choices of the electronic ignitions on the 1200 motor I use but it was set up way to mild to operate the second barrel kicking in ...I don't know what going on top of manifolds you got but my guess is the 1200 ignition is mild and not adjustable in any way ...my vote would be to switch to the 1000 set up ..and probably points as you could tweak the advance and my guess is the 78-79 points set up would be the desired one to work with cause they actually advanced more than the 75-77 set up ...as said C5 is nest ever but you would need programmable set up to with is about impossible I'd say ...I am sure if something ever happens to my c5 the bike is dead lol...good luck with your bike the potential in that set up of 1000 heads and 1200 short block is huge my bike been set up that way about a decade now ..I don't ride it much anymore ..but it seems too fire right up even after long sits of not running ..stock carbs would never do that ...